jjfitzy,
The settings that you're looking for are done within the file WINCE420\Platform\xxx\files\config.bib. Look in the Platform Builder help and it will explain to you the format of a bib file. Please be aware that there is the potential for wiping out your bootloader and other parts of flash in doing this.
I would also recommend checking out a previous thread related to the config.bib.
http://www.logicpd.com/su.../viewtopic.php?t=279
Regards,